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MIT Anna University
Chromepet, Chennai-44 India.

1999 to 2009
1Majumder S, Gupta R, Reddy HS, Sinha S, Muley A, Kolluru GK, Chatterjee S “Cadmium attenuates bradykinin driven nitric oxide production by interplaying with the localization pattern of endothelial nitric oxide synthase” (2009) Biochemistry and Cell Biology (In press).
2Banerjee S, Cui J, Schwartz A, Ghosh SK, Samuelson J. “Giardia, Entamoeba, and Trichomonas enzymes activate metronidazole (nitroreductases) and inactivate metronidazole (nitroimidazole reductases).”; Antimicrob Agents Chemother. 2009 Feb;53(2):458-64.
3Banerjee S, Robbins PW, Samuelson “Molecular characterization of nucleocytosolic O-GlcNAc transferases of Giardia lamblia and Cryptosporidium parvum.”, J.Glycobiology. 2009 Apr; 19(4): 331-6.
4Aparajita Dey and Karthikeyan Chandrasekaran “Hyperglycemia Induced Changes in Liver: In vivo and In vitro Studies”, Current Diabetes Reviews, 2009, 5, 67-78.
5Arora Shvetambri, Tyagi Yogesh Kumar, Kumar Ajit, Majumder Syamantak, Saluja Daman, Raj Hanumantharao Guru, Chatterjee S, Saso Luciano, Prasad Ashok Kumar, Parmar Virinder Singh “The Role of Calreticulin Transacetylase in the Activation of Human Platelet Nitrite Reductase by Polyphenolic Acetates” (2009) Biological & Pharmaceutical Bulletin. 32(2):161-5.
6G. Aravindhan, G. Ramesh Kumar, R. Sathish Kumar and K. Subha (2009) “AJAX Interface: A Breakthrough in Bioinformatics Web Applications”. Proteomics Insights 2 1-7.
7G. Aravindhan, R. Sathish Kumar, K. Subha, T.K.Subazini, Alpana Dey, Krishna Kant and G. Ramesh Kumar (2009) “AIM-BLAST-AJAX Interfaced Multisequence Blast”. Proteomics Insights 2, p 9-13.
8Gopal Ramesh Kumar, Thankaswamy Kosalai Subazini, Kalyanamoorthy Subha, Chinnasamy Perumal Rajadurai and Latha Prabakar (2009) “CanGeneBase (CGB) - a database on cancer related genes”. Bioinformation. 3(10),422-424.
9P.M.Sivakumar,S. Naga Vignesh , G. Ramesh Kumar and Mukesh Doble (2009) “Computational approaches to enhance activity of Taxanes as antimitotic agent”. Chemical Biology & Drug Design.
10K Palani Kannan, TK Subazini, CP Rajadurai, S Naga Vignesh and G Ramesh Kumar (2009) “Computational motif signature discovery and validation of gene prediction in Aspergillus terreus NIH 2624”. International Journal of Computational Intelligence Research. (Acceped).
11Gopal Ramesh Kumar, Ganesan Aravindhan, Thankaswamy Kosalai Subazini and Radhakrishnan Sathish Kumar (2009) “Bioinfotracker: A novel system for advanced genome functional insight”. Journal of Biological Sequence (Accepted).
12Barh D, Kumar A, Chatterjee S, and Liloglou T (2009) “Molecular Pathogenesis and Drug Targets in Cardiac Myxoma”. Current Cancer Drug Targets (In Press).
13Majumder S, Rajaram M, Muley A, Himabindu Reddy S, Tamilarasan KP, Kolluru GK, Sinha S, Siamwala JH, Gupta R, Ilavarasan R, Venkataraman S, Sivakumar KC, Anishetty S, Pradeep Kumar G, Chatterjee S. (2009) “Thalidomide attenuates nitric oxide driven angiogenesis by interplaying with soluble guanylate cyclase”. British Journal of Pharmacology (In Press).
14Kalyanamoorthy Subha and Gopal Ramesh Kumar (2008) “Assessment for the identification of better HDAC inhibitor class through binding energy calculations and descriptor analysis”. Bioinformation.3(5), 218-222.
15Arun Stephen Rajkumar and B.M.Jaffar Ali, Microrheology of concentrated DNA solutions using optical tweezers, Bulletin of Materials Science, 2008 (in press)
16Kolluru GP, Tamilarasan KP , Rajkumar AS, Geetha Priya S, Rajaram M, Saleem NK, Majumder S, Jaffar Ali BM, Illavazagan G, Chatterjee S. (2008) Hypoxia promotes leakiness in endothelium: Nitric oxide-cGMP shields the endothelial cells from hypoxia-mediated leakiness. Eur. J. Cell Biol. 87:147-61.
17R. Gupta, A. Mittal and K. Singh, “A time series based feature extraction approach for prediction of protein structural class,” EURASIP Journal on Bioinformatics and Systems Biology, Article ID 235451, pp. 1–7, 2008, doi:10.1155/2008/235451. [PMID: 18464911].
18Majumder S, Muley A, Kolluru GP, Saurabh S, Tamilarasan KP, Chandrasekhar S, Reddy H, Purohit SB, Chatterjee S (2007) Cadmium reduces nitric oxide production by impairing phosphorylation of endothelial nitric oxide synthase: A basis for cadmium-mediated endothelial dysfunction. Bicohem Cell Biol 85:709-720.
19Majumder S, Tamilarasan KP, Kolluru GK, Muley A, Nair C M, Omanakuttan A, Murty KVGK and Chatterjee S. (2007) Activated pericyte attenuates endothelial functions: Nitric oxide cGMP rescues activated pericyte associated andothelial dysfunctions. Bicohem Cell Biol. 85 (6):709-20.
20Hypoxia promotes leakiness in endothelium:Nitric oxide-cGMP shields the endothelial cells from hypoxia-mediated leakiness -Gopi Krishna Kolluru,Tamilarasan KP, Arun S Rajkumar, Geetha Priya Subramaniam, Megha Rajaram,Niyas K Saleem, Syamantak Majumder,
21Jaffar Ali BM, Illavazagan G, Suvro Chatterjee. European Journal of Cell Biology, in press.
22Syamantak Majumder, K.P.Tamilarasan, Gopi Krishna Kolluru, Ajit Muley, C.Madhavan Nair, Athira Omanakuttan, K.V.G.K.Murty and Suvro Chatterjee. Activated pericyte attenuates endothelial functions: Nitric oxide/cGMP rescues activated percyte associated endothelial dysfunctions. Biochemistry and Cell biology (in press).
23Kadalmani K, Deepa S, Bagavathi S, Anishetty S, Thangaraj K, Gajalakshmi P. Independent origin of 185delAG BRCA1 mutation in an Indian family. Neoplasma. 2007;54(1):51-6. PMID: 17203892 [PubMed - indexed for MEDLINE]
24Gajalakshmi P, Natarajan TG, Selvi Rani D, Thangaraj K.A novel BRCA1 mutation in an Indian family with hereditary breast/ovarian cancer. Breast Cancer Res Treat. 2007 Jan;101(1):3-6. Epub 2006 Nov 28. PMID: 17131039 [PubMed - indexed for MEDLINE]
25N. Rameshbabu, T.S. Sampath Kumar, T.G. Prabhakar, V.S.Sastry, K.V.G.K. Murty, K. Prasada Rao.�� Antibacterial nanosized silver substituted hydroxyapatite: synthesis and characterization J.Biomed. Mat. Res. 80A (2007) 581-591
26Kang�-Decker N, Cao S, Chatterjee S, Yao J, Egan LJ, Semela D, Mukhopadhyay D, Shah V. (2007) Nitric oxide promotes endothelial cell survival signaling through S-nitrosylation and activation of dynamin-�2. J Cell Sci 120:492�501
27M. Sankar, C.Madhavan Nair, K.V.G.K.Murty, P.Manikandan. Transesterification of cyclic carbonates with methanol at ambient conditions over tungstate-based solid catalysts. Appl. Catalysis A, 312, 108-114
28Bibekananda Sundaray,V. Subramanian,T. S. Natarajan and K Krishnamurthy. Electrical conductivity of a single electrospun fiber of poly (methyl methacrylate) and multiwalled carbon nanotube nanocomposites. Appl.Phys. Lett., 88, 143114-1-143114-3.*/Also selected for publication in April 17, 2006 issue of Virtual Journal of Nanoscale Science & Technology, vol-13, Issue-15/
29Iwakiri Y, Satoh A, Chatterjee S, Toomre DK, Chalouni CM, Fulton D, Groszmann RJ, Shah VH, Sessa WC. (2006) Nitric oxide synthase generates nitric oxide locally to regulate compartmentalized protein S�nitrosylation and protein trafficking. Proc Natl Acad Sci U S A. Dec 26;103(52):19777�-82
30K.P. Tamilarasan, Gopi Krishna Kolluru, Megha Rajaram, M.Indhumathy, R.Saranya, Chatterjee S (2006). Thalidomide attenuates nitric oxide mediated angiogenesis by blocking migration of endothelial cells. BMC Cell Biol. 4;7:17.�
31Kolluru GK, Tamilarasan KP, Geetha Priya S, Durgha NP, Chatterjee S (2006) Cadmium induced endothelial dysfunctions: Consequence of defective migratory pattern of endothelial cells in association with poor nitric oxide availability under cadmium challenge. Cell Biol. Int. 30(5): 427-�38.
32Perri R, Langer DA, Chatterjee S, Gibbons SJ, Gadgil J, Farrugia G, Shah V (2006) Defects in cGMP-�PKG pathway contribute to impaired NO dependent relaxation in activated hepatic stellate cells. Am J Physiol Gastrointest Liver Physiol. 290(3):G535
33Yuan, X, Hu, Z.Z., Wu, H.T., Torii, M, Narayanaswamy, M, Ravikumar, K.E., Vijay� Shanker,�� K,�� Wu,�� C.H.�� (2006)�� 'An�� online�� literature�� mining�� tool�� for�� protein� phosphorylation.' Bioinformatics, Vol.22, No.13, pp.1668�1669
34C.Madhavan Nair, C Sabna, K.V.G.K.Murty, S.V.Ramanan. Permeability of R6G across Cx 43 hemichannels through a novel combination of patch clamp and surface enhanced Raman spectroscopy. Pramana, 65(4), 653-661
35Lee J.S., Decker NK, Chatterjee S, Yao J, Friedman S, Shah V (2005) Mechanisms of nitric oxide interplay with Rho GTPase family members in modulation of actin membrane dynamics in pericytes and fibroblasts. Am J. Pathol. 166:1861�-1870.
36S.V. Ramanan, V. Valiunas, P.R.Brink , Non-Stationary Fluctuation Analysis of Macroscopic Gap Junction Channel Records, J. Membrane Biol., 205, 81–88, Sept.2005
37M. Naraya naswamy, KERavi-kumar, K. Vijay-Shanker “Beyond the clause: extraction phosphorylation information from Medline”, Bioinformatics, 21(Suppl. 1):i319–327 abstracts, 2005.
38Hu, Z. Z., Narayanaswamy, M., Ravikumar, K.E., Vijay�Shanker, K., and Wu, C. H.,� 'Literature Mining and Database Annotation of Protein Phosphorylation Using a�� Rule� Based System.'� Bioinformatics , Vol.21, No.11, pp.2759�2765
39K. V. G. K. Murty, T. Manisekharan and T. K. K. Srinivasan. Vibrational spectroscopic investigations of 4-alkyl 40-cyano biphenyls [CnH2n�1-C6H5-C6H5-CN, n =9, 10 AND 11] Mol. Cryst. Liq. Cryst (accepted for publication)
40Lim I, Strege PR, Gibbons SJ, Lyford GL, Miller SM, Sarr MG, Chatterjee S, Shah V, Farrugia G (2004) Carbon monoxide activates human intestinal smooth muscle L-�type Ca ++ channels through a nitric oxide dependent mechanism. Am J. Physiol. 288:G7-G14
41Single Particle Tracking of Correlated Bacterial Dynamics -G.V.Soni, B.M.Jaffar Ali, Y.Hatwalne and G.V.Shivashankar� Biophys. J. 84 (2003) 2634-26377
422003. J. Prikulis, K.V.G.K.Murty, H.Olin and M.K�ll. Large-area topography analysis and near-field Raman spectroscopy using bent fibre probes. Journal of Microscopy, 210 (3) 269-273
43H. Gopalkrishna Gadiyar, K M Sangeeta Maini, R. Padma and H.S. Sharatchandra, Entropy and Hadamard Matrices, J. Phys. A: Math. Gen. 36(2003)L109-L11
44P. Gajalakshmi, A. Balasundaram, P. Venkatesan, S.T. Santhiya, A. Ramesh., Cytogenetic studies on spray painters in South India, Mutation Research 514 (2002)1-6
45P. Gajalakshmi, Protima Mallick, P. Venkatesan, S. T. Santhiya A. Ramesh., Studies on Sister Chromatid Exchanges in Peripheral lymphocytes of Spray Painters. Journal of Environmental Pathology, Toxicology, Oncology 21(1) (2002) 63-65.
46Sharmila Ani-shetty, Gautam Pennathur and� Ramesh Anishetty, “Tripeptide analysis of protein structures” BMC Structural Biology 2002, 2:9, dec.2002

1Gajalakshmi P., Natarajan T.G. (2021) Biomarkers of Oxidative Stress in Cancer, and Their Clinical Implications. In: Chakraborti S., Ray B.K., Roychowdhury S. (eds) Handbook of Oxidative Stress in Cancer: Mechanistic Aspects. Springer, Singapore.
2Guha, S., and Subramaniyam, R. (2021). Amyloid beta peptides, tau protein acetylation and therapeutic strategies for treating Alzheimer’s disease: a review. Life Res, 4(1), 8.
3Preeth, D. R., Saravanan, S., Shairam, M., Selvakumar, N., Raja, I. S., Dhanasekaran, A., Vimalraj S & Rajalakshmi, S. (2021). Bioactive Zinc (II) complex incorporated PCL/gelatin electrospun nanofiber enhanced bone tissue regeneration. European Journal of Pharmaceutical Sciences, 160, 105768.
4Chatterjee, S. (2021). Titanate incorporated anodized coating on magnesium alloy for corrosion protection, antibacterial responses and osteogenic enhancement. Journal of Magnesium and Alloys.
5Sundaresan, L., Giri, S., Singh, H., & Chatterjee, S. (2021). Repurposing of thalidomide and its derivatives for the treatment of SARS-coV-2 infections: Hints on molecular action. British journal of clinical pharmacology.
6Kumar, P., Zhang, S., Koedam, M., Demmers, J., Chatterjee, S., van Leeuwen, J., and van der Eerden, B. (2021). Inhibition of hypoxia-induced Mucin 1 alters proteomic composition of human osteoblast-produced extracellular matrix, leading to reduced osteogenic and angiogenic potential. Bone Reports, 14, 100858.
7Pramanick, A., Chakraborti, S., Mahata, T., Basak, M., Das, K., Verma, S. K., ... & Maity, B. (2021). G protein β5-ATM complexes drive acetaminophen-induced hepatotoxicity. Redox Biology, 43, 101965.
8Akila Swaminathan, Koneti Brahma Kalyani, Senthil Kumar Sudhagar, Srinivasan Bhuvaneswari, S Thupali Nagalatha, T Leon Stephan Raj, Venil N Sumantran, Suvro Chatterjee. (2021). Nitric oxide mitigates thalidomide-induced abnormalities during germination and development of fennel seeds, Toxicology Research, Volume 10, Issue 4, August 2021, Pages 893–901,
9Tarun Mahata, Abhishek Singh Sengar, Madhuri Basak, Kiran Das, Arnab Pramanick, Sumit Kumar Verma, Praveen Kumar Singh, Sayan Biswas, Subhasish Sarkar, Sudipta Saha, Suvro Chatterjee, Adele Stewart, Biswanath Maity. (2021). Hepatic Regulator of G Protein Signaling 6 (RGS6) drives non-alcoholic fatty liver disease by promoting oxidative stress and ATM-dependent cell death, Redox Biology, 2021,102105,ISSN 2213-2317,
10Sandhya Sreedharan, Kavitha Sankaranarayanan, Computational prediction of microRNA targets of ion channels and aquaporins in Aedes aegypti. Journal of vector borne disease.DOI: 10.4103/0972-9062.308801
11B Sampath, P Kathirvelu, K Sankaranarayanan - Innate Immunity in Health and Disease, 2021. Stem Cell Therapy and Regenerative Medicine in Autoimmune Diseases. DOI: 10.5772/intechopen.89749
12Senguttuvan, N. B., Subramanian, V., Venkatesan, V., Muralidharan, T. R., & Sankaranarayanan, K. (2021). Clonal hematopoiesis of indeterminate potential (CHIP) and cardiovascular diseases—an updated systematic review. Journal of Genetic Engineering and Biotechnology, 19(1), 1-9.
13Sengupta, P., Mahalakshmi, V., Stebin, J. J., Ganesh, S., Suganya, N., & Chatterjee, S. (2020). Nitric oxide donors offer protection to RBC from storage lesion. Transfusion Clinique et Biologique, 27(4), 229-236.
14Vijayaraghavan, M., Sengupta, P., Sumantran, V. N., Suganya, N., & Chatterjee, S. (2020). Induced Stress on Red Blood Cell Promotes Red Blood Cell-Endothelial Adhesion. Cell and Tissue Biology, 14(6), 448-457.
15Jayaprakash, N., Suresh, R., Rajalakshmi, S., Raja, S., Sundaravadivel, E., Gayathri, M., & Sridharan, M. (2020). One-step synthesis, characterisation, photocatalytic and bio-medical applications of ZnO nanoplates. Materials Technology, 35(2), 112-124.
16Nathan, J., and Kannan, R. R. (2020). Antiangiogenic molecules from marine actinomycetes and the importance of using zebrafish model in cancer research. Heliyon, 6(12), e05662.
17Bhuvaneshwari, S., and Sankaranarayanan, K. (2020). Structural and Mechanistic Insights of CRAC Channel as a Drug Target in Autoimmune Disorder. Current drug targets, 21(1), 55-75
18Ramakrishnan, A. M., Kumar, P., Chatterjee, S., and Sankaranarayanan, K. (2020). Differential expression of CRAC channel in alloxan induced diabetic BALB/c mice. Immunopharmacology and immunotoxicology, 42(1), 48-55.
19Zaheer, Z. A., and Sankaranarayanan, K. (2020). In silico analysis of κ-theraphotoxin-Cg2a from Chilobrachys guangxiensis. Indian Journal of Biochemistry and Biophysics (IJBB), 57(4), 458-466.
20Kumar, P., Ghosh, A., Sundaresan, L., Kathirvel, P., Sankaranarayanan, K., & Chatterjee, S. (2020). Ectopic release of nitric oxide modulates the onset of cardiac development in avian model. In Vitro Cellular & Developmental Biology-Animal, 56(8), 593-603.
21Giri S, Katakia YT, Chatterjee S, Gajalakshmi P. Breast cancer drugs perturb fundamental vascular functions of endothelial cells by attenuating protein S-nitrosylation. Clin Exp Pharmacol Physiol. 2020 Jan;47(1):7-15. doi: 10.1111/1440-1681.13181. Epub 2019 Oct 20. PMID:  31549415
22Jhansi R Nathan, B Kurmi, N Soundharapandian & R R Kannan. In vivo molecular validation of VEGF inhibitor extracted from marine Actinomycetes in zebrafish embryos Indian Journal of Geo Marine Sciences Vol. 49 (06), June 2020, pp. 970-974
23Swaminathan A, Ranganathan S, Baskar K, Bhuvaneswari S, Skandaprasad S,  Gajalakshmi P, Chatterjee S. Developing a partially perfused liver model using caprine liver explant conditioned to the chicken extra-embryonic perfusion system. Tissue Cell. Volume 62,  February 2020, 101308
24Dharanibalan Kasiviswanathan, Rajadurai Chinnasamy Perumal, Srinivasan Bhuvaneswari, Pavitra Kumar, Lakshmikirupa Sundaresan, Manuel Philip, Sajesh Puthenpurackal Krishnankutty, Suvro Chatterjee. Interactome of miRNAs and transcriptome of human umbilical cord endothelial cells exposed to short term simulated microgravity. Nature Microgravity. [In press 2020]
25ArpitaRoy, Susheel Kumar Nethi, Natarajan Suganya, Megha Raval, Suvro Chatterjee, Chitta Ranjan Patra. Attenuation of cadmium-induced vascular toxicity by pro-angiogenic nanorods. Materials Science and Engineering:  C Mater Biol Appl.  2020 Oct; 115:111108. doi: 10.1016/j.msec.2020.111108. Epub 2020 May 21
26K. Saranya; S. Bhuvaneswari; Suvro Chatterjee, Ph. D.; N. Rajendran. Biocompatible gadolinium coated magnesium alloy for biomedical applications. Journal of Materials Science. (2020) 55:11582†“11596
27Anantha Maharasi Ramakrishnan, Pavitra Kumar, Suvro Chatterjee, Kavitha Sankaranarayanan. Differential expression of CRAC channel in alloxan induced Diabetic BALB/c mice, published by Immunopharmacology and Immunotoxicology. Taylor and Francis. Vol. 42, Issue 1, pp. 48-45
28Jyotirmaya Behera, Shunmugam Nagarajan, Uttara Saran, Ravi Kumar, Gaurav Kumar Keshri, Geetha Suryakumar, Suvro Chatterjee. Nitric oxide restores peripheral blood mononuclear cell adhesion against hypoxia via NO-cGMP signaling. Cell Biochemistry & Function, published by Wiley. 2020
29Srinivasan Bhuvaneswari, Skandaprasad Sivasri, Natarajan Suganya, Ranganathan Srinithi, and Suvro Chatterjee. Shielding negative impact of cadmium on avian embryo by supplementing with beetroot juice. Journal of Environmental pathology, toxicology and oncology. Elsevier 2020
30Akila Swaminathan, Srinithi Ranganathan, Srinivasan Bhuvaneswari, Sivasri Skandaprasad, Suvro Chatterjee. Study of coupling avian in-ovo perfusion system with ex-vivo caprine liver. Tissue and Cell. Elsevier 2020
31Bhuvaneshwari, S., and Sankaranarayanan, K. (2019). Identification of potential CRAC channel inhibitors: Pharmacophore mapping, 3D-QSAR modelling, and molecular docking approach. SAR and QSAR in Environmental Research, 30(2), 81-108.
32Krishnan, A. M. R., and Sankaranarayanan, K. (2019). Expression of HCN and sodium channels in murine model of Type I diabetes. Genetics and Molecular Research, 18(2).
33Pachamuthu, S., Zaheer, Z. A., Sampath, B., Muralidharan, D., Ramach, R., and Sankaranarayanan, K. (2019). Electroporation induced membrane permeability changes at the ionic level. Genetics and Molecular Research, 18(3).
34Vimalraj S, Pichu S, Pankajam T, Dharanibalan K, Djonov V, Chatterjee S. Nitric oxide regulates intussusceptive-like angiogenesis in wound repair in chicken embryo and transgenic zebrafish models. 2019 Jan 1; 82:48-58. doi: 10.1016/j.niox.2018.11.001. Epub 2018 Nov 12
35Veeriah V, Paone R, Chatterjee S, Teti A, Capulli M. Osteoblasts Regulate Angiogenesis in Response to Mechanical Unloading. Springer. Calcif Tissue Int. 104,  344–354 (2019). 15 Mar 2019
36Vimalraj S, Saravanan S, Anuradha D, Chatterjee S. Models to investigate intussusceptive angiogenesis: A special note on CRISPR/Cas9 based system in zebrafish. International Journal of Biological Macromolecules. Volume 123,  15 February 2019, Pages 1229-1240.
37Sundaresan L, Kumar P, Manivannan J, Balaguru UM, Kasiviswanathan D, Veeriah V, Anishetty S, Chatterjee S. Thalidomide, and Its Analogs Differentially Target Fibroblast Growth Factor Receptors: Thalidomide Suppresses FGFR Gene Expression while Pomalidomide Dampens FGFR2 Activity. Chemical Research in Toxicology 32(4). 2019 Apr 15;32(4):589-602.  doi: 10.1021/acs.chemrestox. 8b00286. Epub 2019 Mar 15.
38Siamwala JH, Kumar P, Veeriah V, Muley A, Rajendran S, Konikkat S, Majumder S, Mani KP, Chatterjee S. Nitric Oxide Reverses the Position of the Heart during Embryonic Development. Int. J. Mol. Sci. 2019,  20(5), 1157; Mar 2019
39Siamwala JH, Kumar P, Veeriah V, Muley A, Rajendran S, Konikkat S, Majumder S, Mani KP, Chatterjee S. Nitric Oxide Reverses the Position of the Heart during Embryonic Development. Int. J. Mol. Sci. 2019,  20(5), 1157; Mar 2019
40Giri S, Bose JC, Chandrasekar A, Tiwary BK, Gajalakshmi P, Chatterjee S.Increased Plasma Nitrite and von Willebrand Factor Indicates Early Diagnosis of Vascular Diseases in Chemotherapy Treated Cancer Patients.Cardiovasc Toxicol. 2019 Feb;19(1):36-47
41Suvendu Giri, Jagadesh Chandra Bose, Ajay Chandrasekar, Basant K. Tiwary, Palanivel Gajalakshmi, Suvro Chatterjee. Increased Plasma Nitrite and von Willebrand Factor Indicates Early Diagnosis of Vascular Diseases in Chemotherapy Treated Cancer Patients. Cardiovascular Toxicology, 2018, 1-12
42Sundaresan L, Ghosh A, Kathirvel P, Thilak A, Katakia YT, Sankaranarayanan K, Chatterjee S.Thalidomide remodels developing heart in chick embryo: discovery of a thalidomide mediated hematoma in heart muscle.Kumar P, Kumar HA, Naunyn Schmiedebergs Arch Pharmacol. 2018 Oct;391(10):1093-1105. doi: 10.1007/s00210-018-1532-2. Epub 2018 Jul 7.
43Mani A, Sankaranarayanan K. In Silico Analysis of Natural Resistance-Associated Macrophage Protein (NRAMP) Family of Transporters in Rice. Protein J. 2018 Jun;37(3):237-247. doi: 10.1007/s10930-018-9773-y.
44Priyadarshan K., Bhuvaneshwari Sampath and Kavitha Sankaranarayanan, MiRNA mediated stem cell therapy for Cardiac Arrhythmia (Frontiers in Stem Cell and Regenerative Medicine Research, Bentham Science Publishers) (2018)
45Anitha Mani and Kavitha Sankaranarayanan, Heavy metal and mineral element induced Abiotic stress in rice plant. (Rice, Intech Open Publishers) (2018)
46Nupoor Chowdhary and Gopal Ramesh Kumar (2018) Elementary flux mode analysis of central carbon metabolism in Caldicellulosiruptor saccharolyticus to enhance hydrogen production.International Journal of Scientific Research in Biological Sciences.Vol.5, Issue.5, pp.108-116.
47Ravishankar, Kartik, K. M. Shelly, Raj Preeth Desingh, Rajalakshmi Subramaniyam, Abathodharanan Narayanan, and Raghavachari Dhamodharan. Green, Solid-State Synthesis of Maleated Chitosan and Ionotropic Gelation with Chitosan. ACS Sustainable Chemistry & Engineering 6, no. 11 (2018): 15191-15200
48Sadhasivam, Balaji, Kartik Ravishankar, Rajpreeth Desingh, Rajalakshmi Subramaniyam, and Raghavachari Dhamodharan. Biocompatible Porous Scaffolds of Chitosan/Poly (EG-ran-PG) Blends with Tailored Pore Size and Nontoxic to Mesenchymal Stem Cells: Preparation by Controlled Evaporation from Aqueous Acetic Acid Solution. ACS Omega 3, no. 8 (2018): 10286-10295
49Suvendu Giri, Jeganathan Manivannan, Bhuvaneswari Srinivasan, Lakshmikirupa Sundaresan, Palanivel Gajalakshmi, Suvro Chatterjee. “A proteome-wide systems toxicological approach deciphers the interaction network of chemotherapeutic drugs in the cardiovascular milieu”. RSC Advances 2018, 8(36):20211-20221
50Chitra Jeyaram, Manuel Philip, Rajadurai Chinnasamy Perumal, Jubina Benny, Jayasankar MJ, Maniramakrishnan Santhana Ramasamy 2018. A Computational Approach to Identify Novel Potential Precursor miRNAs and Their Targets from Hepatocellular Carcinoma Cells, Current Bioinformatics (E-pub Ahead of Print), DOI: 10.2174/1574893613666180413150351
51Vimalraj S, Rajalakshmi S, Raj Preeth D, Vinoth Kumar S, Deepak T, Gopinath V, Murugan K, Chatterjee S. (2018) “Mixed-ligand copper (II) complex of quercetin regulate osteogenesis and angiogenesis”. Mater Sci Eng C Mater Biol Appl. 83:187-194. doi: 10.1016/j.msec.2017.09.005.
52Swaminathan A, Kasiviswanathan D, Balaguru UM, Kolluru GK, SuryaKumar G, Chattejee S. “Hypoxia perturbs endothelium by re-organizing cellular actin architecture: Nitric oxide offers limited protection” Tissue and Cell, Volume 50 February 2018, Pages 114-124
53Suganya N, Dornadula S, Chatterjee S, Mohanram RK. (2018) “Quercetin improves endothelial function in diabetic rats through inhibition of endoplasmic reticulum stress-mediated oxidative stress”. Eur J Pharmacol. 819:80-88. doi: 10.1016/j.ejphar.2017.11.034. Epub 2017 Nov 21.
54Subramaniyam Rajalakshmi, Selvaraj Vimalraj, Desingh Raj preeth, Sekaran Saravanan, Manickaraj Shairam, Suvro Chatterjee. “Synthesis, characterization of Silibinin/phenanthroline/neocuproine copper (II) complexes for augmenting bone tissue regeneration: An In vitro analyses”. JBIC Journal of Biological Inorganic Chemistry. Accepted on May 3rd 2018 (In press)
55Vimalraj S, Rajalakshmi S, Saravanan S, Preeth DR, Vasanthi RL, Shairam M, Chatterjee S. “Synthesis and characterization of zinc-silibinin complexes: a potential bioactive compound with angiogenic, and antibacterial activity for bone tissue engineering. Colloids and Surfaces B: Biointerfaces. 2018 Jul 1; 167:134-43.
56Gajalakshmi P, Majumder S, Viebahn CS, Swaminathan A, Yeoh GC, Chatterjee S. “Interleukin-6 secreted by bipotential murine oval liver stem cells induces apoptosis of activated hepatic stellate cells by activating NF-κB-inducible nitric oxide synthase signaling”. Biochem Cell Biol. 2017 Apr;95(2):263-272. PMID: 28177770
57Appukuttan Rajeshkumar, Sahadevan Sajikumar, Chitra Jeyaram, Maniramakrishnan Santhana Ramasamy, 2017, “Studies on pesticide removing efficacy and antibacterial activity of Dhathri eat pure natural vegetable cleaner for fruits and vegetables”, International Journal of Ayurveda and Pharma Research, 5(1):36-45.
58Pichu S, Sathiyamoorthy J, Vimalraj S, Viswanathan V, Chatterjee S. (2017) “Impact of lysyl oxidase (G473A) polymorphism on diabetic foot ulcers”. Int J Biol Macromol.103:242-247. doi: 10.1016/j.ijbiomac.2017.05.050. Epub 2017 May 15.Â
59Grace Nirmala J, Evangeline Celsia S, Swaminathan A, Narendhirakannan RT, Chatterjee S. (2017) “Cytotoxicity and apoptotic cell death induced by Vitis vinifera peel and seed extracts in A431 skin cancer cells”. Cytotechnology. doi: 10.1007/s10616-017-0125-0. [Epub ahead of print] Â
60Veeriah V, Kumar P, Sundaresan L, Mafitha Z, Gupta R, Saran U, Manivannan J, Chatterjee S. (2017) “Transcriptomic Analysis of Thalidomide Challenged Chick Embryo Suggests Possible Link between Impaired Vasculogenesis and Defective Organogenesis”. Chem Res Toxicol. 30(10):1883-1896. doi: 10.1021/acs.chemrestox.7b00199. Epub 2017 Sep 27.Â
61Krishnaswamy VR, Balaguru UM, Chatterjee S, Korrapati PS (2017). “Dermatopontin augments angiogenesis and modulates the expression of transforming growth factor beta 1 and integrin alpha 3 beta 1 in endothelial cells”. Eur J Cell Biol. 96(3):266-275. doi: 10.1016/j.ejcb.2017.02.007.Â
62Saran U, Mani KP, Balaguru UM, Swaminathan A, Nagarajan S, Dharmarajan AM, Chatterjee S (2017) “sFRP4 signalling of apoptosis and angiostasis uses nitric oxide-cGMP-permeability axis of endothelium”. Nitric Oxide. 1; 66:30-42. doi: 10.1016/j.niox.2017.02.012Â
63Vimalraj S, Sumantran VN, Chatterjee S (2017) “MicroRNAs: Impaired vasculogenesis in metal induced teratogenicity”. Reprod Toxicol. 70:30-48. doi: 10.1016/j.reprotox.2017.02.014.Â
64Manickaraj S, Thirumalai D, Manjunath P, Sekarbabu V, Jeganathan S, Sundaresan L, Subramaniyam R, Jeganathan M. Oxidative environment causes molecular remodeling in embryonic heart— a metabolomic and lipidomic fingerprinting analysis. Environmental Science and Pollution Research. 2017 Oct 1;24(30):23825-33. Â
65B. U. Nair S Rajalakshmi, N Priya, Thermal analysis of copper (II) benzimidazolylterpyridine and dimethylphenanthroline ligands. Advances in Central Sciences. Nov 2016, 1;1:13-17
66Rajendran S, Kumar P, Rajendran K, Chatterjee S, Avian Shell –less culture model: A flexible model to study the events from stem cells to organogenesis S. Research Journal of Biotechnology (In press).
67Silambarasan T, Manivannan J, Raja B, Chatterjee S, Prevention of cardiac dysfunction, kidney fibrosis and lipid metabolic alterations in l-NAME hypertensive rats by sinapic acid-Role of HMG-CoA reductase, Eur J Pharmacol.2016 Mar 2. pii: S0014-2999(16)30116-9.
68Nagarajan S, Raj RK, Saravanakumar V, Balaguru UM, Rajendran VK, Shathya Y, Jaffar ABM, Sumantran V, Chatterjee S. Mechanical perturbations triggers endothelial nitric oxide synthase activity in red blood cells, Scientific Reports (In press). 2016
69Balaguru UM, Sundaresan L, Manivannan J, Majunathan R, Mani K, Swaminathan A, Venkatesan S, Kasiviswanathan D, Chatterjee S. Disturbed flow mediated modulation of shear forces on endothelial plane: A proposed model for studying endothelium around atherosclerotic plaques, Scientific Reports (In press) 2016
70Vimal Veeriah, Angelo Zanniti, Riccardo Paone, Chatterjee S, Nadia Rucci, Anna Teti, Mattia Capulli, Interleukin-1β, lipocalin 2 and nitric oxide synthase 2 are mechano-responsive mediators of mouse and human endothelial cell-osteoblast crosstalk, Scientific Reports (In press), 2016
71Bhanushali U, Rajendran S, Sarma K, Kulkarni P, Chatti K, Chatterjee S, Ramaa CS, 5-Benzylidene-2,4-thiazolidenedione derivatives: Design, synthesis and evaluation as inhibitors of angiogenesis targeting VEGR-2, Bioorganic Chemistry (In press) 2016
72Ramaraj Kannan and G.Ramesh Kumar, Meta-analysis of marine metagenome for functional and taxonomic prediction, Marine metagenome(Accepted),2016
73Sampath B, Sankaranarayanan K. Glu106 targeted inhibitors of ORAI1 as potential Ca2+ release-activated Ca2+ (CRAC) channel blockers - molecular modeling and docking studies. J Recept Signal Transduct Res. 2016 Feb 19:1-14. [Epub ahead of print]
74Rajendran S, Sundaresan L, Rajendran K, Selvaraj M, Gupta R, Chatterjee S. (2016) The expression dynamics of mechanosensitive genes in extra-embryonic vasculature after heart starts to beat in chick embryo. Biorheology pp. 1-15, 2016. doi:Â 10.3233/BIR-15075
75Rajendran S, Kumar P, Rajendran K, Chatterjee S (2016) Avian Shell - less culture model: A flexible model to study the events from stem cells to organogenesis S. Research Journal of Biotechnology (Accepted).
76Pachamuthu S, Jothi V, Ramachandran RP, Sankaranarayanan K, Sundararajan R (2016) Influence of Electrodes on Electric Field Distribution for Effective Electrochemotherapy. J Cancer Prev Curr Res 4(1): 00107. DOI: 10.15406/jcpcr.2016.04.00107
77Anantha Maharasi Ramakrishnan and Kavitha Sankaranarayanan (2016), Understanding Autoimmunity: The Ion Channel Perspective. AutoImmunity Reviews 2016 Feb 11. pii: S1568-9972(16)30030-1. doi: 10.1016/j.autrev.2016.02.004. [Epub ahead of print] Review.
78Sandhya Sreedharan, Gugan Kothandan and Kavitha Sankaranarayanan (2016), Structural insights into the Aedes aegypti aquaporins and aquaglyceroporins an in-silico study. Journal of Receptor and Signal Transduction, Journal of Receptor and Signal Transduction 10.3109/10799893.2016.1141954 Feb 24 2016
79Kumar P, Kasiviswanathan D, Sundaresan L, Kathirvel P, Veeriah V, Dutta P, Sankaranarayanan K, Gupta R, Chatterjee S. Harvesting clues from genome wide transcriptome analysis for exploring thalidomide mediated anomalies in eye development of chick embryo: Nitric oxide rectifies the thalidomide mediated anomalies by swinging back the system to normal transcriptome pattern. Biochimie. 2016 Feb;121:253-67. doi: 10.1016/j.biochi.2015.12.013.
80Narayanaswamy R, Shymatak M, Chatterjee S, Wai LK, Arumugam G. Inhibition of Angiogenesis and Nitric Oxide Synthase (NOS), by Embelin & Vilangin Using in vitro, in vivo & in Silico Studies (2015), Adv Pharm Bull. 4(Suppl 2):543-8.
81Ramesh Kumar G and Nupoor Chowdary (2015) Bioinformatics Approach for augmentation of biohydrogen production. Renewable & Sustainable Energy Reviews.Volume 56, April 2016, Pages 1194-1206.
82Ramesh Kumar G Avinash Ramani and Manonanthini Thangam (2015) Effective In-Silico Screening of Natural and Synthetic Compounds for inhibition of p-38 MAPK as a therapeutic approach in progressive End-Stage Renal Failure. International Journal of Pharma and Bio Sciences. 6(4):(P)70-82
83Kasi Murugan, Sangeetha Shanmugasamy, Saleh Al-Sohaibani, Naga Vignesh, Kandavel Palanikannan Antony Dhason Vimala and Gopal Ramesh Kumar (2015) TaxKB-A Knowledge Base for new Taxane related Drug Discovery. 8:19.doi:10.1186/s13040-015-0053-5.BioData Mining.
84Nupoor Chowdhary, Ashok Selvaraj, Lakshmi Krishnakumaar, Gopal Ramesh Kumar (2015) Genome wide Re-annotation of Caldicellusiruptor saccharolyticus with New Insights into Genes involved in Biomass Degradation and Hydrogen Production. PLOS ONE. 10.1371/journal.pone.0133183
85Joshi R, Arora S, Kumar A, Manral S, Rohil V, Goel S, Priya N, Singh P, Ponnan P, Chatterjee S, Dwarakanath BS, Saluja D, Rawat DS, Prasad AK, Saso L, Kohli E,DePass AL, Bracke ME, Parmar VS, Raj HG. The Competence of 7,8-Diacetoxy-4-Methylcoumarin and Other Polyphenolic Acetates in Mitigating the Oxidative Stress and their Role in Angiogenesis. Curr Top Med Chem. 2015;15(2):179-86.
86Azhar A, Khan MS, Swaminathan A, Naseem A, Chatterjee S, Jairajpuri MA. Oxidized antithrombin is a dual inhibitor of coagulation and angiogenesis:Importance of low heparin affinity. Int J Biol Macromol.2015 Nov 7. pii:S0141-8130(15)30016-7 doi:10.1016/j.ijbiomac.2015.10.013.
87SiamwalaJH1, RajendranS2, ChatterjeeS3Strategies of Manipulating BMP Signaling in Microgravityto Prevent Bone Loss, Vitam Horm. 2015;99:249-72.
88Vinnakota R, Ramakrishnan AM, Samdani A, Venugopal MA, Ram BS, Krishnan SN, Murugesan D, Sankaranarayanan K. A comparison of aquaporin function in mediating stomatal aperture gating among drought-tolerant and sensitive varieties of rice (Oryza sativa L.). Protoplasma. 2015 Dec 2. [Epub ahead of print] PubMed PMID: 26631017.
89Thorat LJ, Priya MK, Thangaraj P, Chatterjee S, Down regulation of dTps1 in Drosophila melanogaster larvae confirms involvement of trehalose in redox regulation following desiccation (2015) Nath BB. Cell Stress and Chaperone
90Inhibitors of Nitric Oxide Synthase: What’s up and what’s next? (2015) Sundaresan L, Giri S, Chatterjee S. Current Enzyme Inhibition doi:10.2174/1573408012666151126185922.
91Devendran A, Nampoothiri SS, Shewade DG, Chatterjee S, Jayaraman B, Chandrasekharan A. Allele, genotype and haplotype structures of functional polymorphic variants in Endothelial nitric oxide synthase (eNOS), Angiotensinogen (ACE) and Aldosterone synthase (CYP11B2) genes in healthy pregnant women of Indian ethnicity (2015) J. Reprod and Infertil. Vol16:4, December 2015.Â
92Manonanthini T and G Ramesh Kumar (2015) CRCDA-Comprehensive Resources for Cancer NGS Data Analysis. Database, 2015, 1-15.doi: 10.1093/database/bav092
93Balaji., R.M., Chitra Jeyaram., Meenakshi Sundaram, K and M.S.Ramasamy, "Studies on Antidiabetic Activity of Indian Medicinal Plants Using Amylase and Glucosidase Inhibitory Activity - A Pathway to Antidiabetic Drugs" World Journal of Medical Sciences 12 (3): 207-212.2015
94Nithya., P., Chitra Jeyaram, Meenakshi Sundaram, K., Chandrasekar, P and M.S.Ramasamy, "Anti Dengue Viral Compounds from Andrographis Paniculata by In silico approach" World Journal of Alternative Medicine 1(2); 10-16.2015
95Sameer Hassan, Manonanthini Thangam, Praveen Vasudevan, G. Ramesh Kumar, Rahul Unni, Gayathri Devi PK and Luke Elizabeth Hanna (2015) A user - friendly web portal for analyzing conformational changes in structures of Mycobacterium tuberculosis. Journal of Molecular Modeling.21:252.DOI 10.1007/s00894-015-2799-6.
96Sudip Mukherjee, Pavithra Sreeram, Ayan Kumar Barui¡, Susheel Kumar Nethi, Vimal, Veeriah, Suvro Chatterjee, K. I. Suresh, Chitta Ranjan Patra "Graphene oxides show angiogenic properties (2015)", Advanced Healthcare Materials. 2015 4(11):1722-32
97Nethi SK, Veeriah V, Baruia AK, Rajendran S, Mattapally S, Misra S, Chatterjee S, Patra CR. "Investigation of molecular mechanisms and regulatory pathways of pro-angiogenic nanorods (2015) Nanomaterial". 2015 7(21):9760-70..
98Murugan K, Sangeetha S, Ranjitha S, Vimala A, Al-Sohaibani SA, Rameshkumar G "HDACiDB: A Database for Histone Deacetylase Inhibitors". Drug Design, Development and Therapy. 9:2257-2264 (2015)
99Soumitra Mohanty, Lakshmanan Jagannathan, Geetanjali Ganguli, Avinash Padhi, Debasish Roy, Nader Alaridah, Pratip Saha Upendra Nongthomba, Gabriela Godaly, Gopal Ramesh Kumar , Sulagna Banerjee, and Avinash Sonawane "A mycobacterial phosphoribosyltransferase promotes bacillary survival by inhibiting oxidative stress and autophagy pathways in macrophages and zebrafish". Journal of Biological Chemistry.DOI: 10.1074/jbc.M114.598482 (2015)
100Sathya.B,Akila Parvathy Dharshini, G Ramesh Kumar "NGS Meta Data Analysis for Identification of SNPs and INDELs Pattern in Human Airway Transcriptome: A Preliminary Indicator for Lung Cancer" Applied and Translational Genomics. 4:4-9, (2015)
101Bhuvaneshwari Sampath, Vivek Sivakumar, Kavitha Sankaranarayanan, Ignacio G. Camarillo, Wan-Ying Lin, Arutselvan Natarajan and Raji Sundararajan Breast cancer treatment using curcumin, the natural herbal biodielectric DOI: 10.1109/CEIDP.2014.6995780 Electrical Insulation and Dielectric Phenomena (CEIDP), 2014 IEEE pp 235 – 238
102M. Krishnapriya M, Sahu G, Pantoja DS, Goldy N, Meenakshi A, Jadhav V, Saran U, B.M. Jaffar Ali, Roberts DD, Bera AK, and Chatterjee S "Tipping off endothelial tubes: Nitric oxide drives tip cells (2014)" Angiogenesis. 2014 Dec 16. [Epub ahead of print]
103Ganesh T, Sivakumar L, Ramasamy M.S and Chitra Jeyaram, "Antifingal activity of polyherbal Siddha formulation - Seemai Agathi ointment" International Journal of Chemical and pharmaceutical science , vol.5(2):156-158. 2014.
104Sutha Revathy, Chitra Jeyaram , M.Murugesan ,Ramasamy,M.S. "In vitro Free radical Scavenging Activity of a Siddha Herbo Mineral Drug-kara soda sathu parpam" Indo American Journal of pharmaceutical research , vol.4(11):5148-5153.2014.
105Sumantha Narayana ,Chitra Jeyaram ,Savita R, Tapase, Viresh Thamke , P.Karthick, Ch.Ramesh, kada Narayanan Murthy, M.S.Ramasamy, Kisan M.Kodam, R.Mohanraju, "Toxicity studies of Trichodesmium erythraeum (Ehrenberg, 1830) bloom extracts" Phoenix Bay, Port Blair ,Andamans, Haramful Algae,vol.40:34-39.2014.
106Thangarasu Silambarasan; Jeganathan Manivannan; Mani Krishna Priya; Natarajan Suganya; Chatterjee S, Boobalan Raja "Sinapic acid protects heart against ischemia/reperfusion injury and H9c2 cardiomyoblast cells against oxidative stress (2014)" Biochem Biophys Res Commun. 2014 Dec 13. pii: S0006-291X(14)02187-1. doi: 10.1016/j.bbrc.2014.12.022. [Epub ahead of print] (Impact factor - 2.3).
107Veeriah V, Saran U, Swaminathan A, Balaguru UM, Thangaraj P, Nagarajan S, Rajendran VK, Chatterjee S. "Cadmium induced embryopathy: Nitric Oxide rescues teratogenic effects of Cadmium (2014)" Toxicol Sci. 2014 Dec 8. pii: kfu258. [Epub ahead of print]. (Impact factor - 4.478).
108Silambarasan T, Manivannan J, Krishna Priya M; Suganya N, Chatterjee S, Raja B "Sinapic Acid Alleviates Hypertension and Cardiovascular Remodeling in Nitric Oxide Deficient Rats (2014)" PLoS One. 2014 Dec 22;9(12):e115682. doi: 10.1371/journal.pone.0115682. eCollection 2014. (Impact factor - 3.234).
109Nethi SK, Mukherjee S, Veeriah V, Barui AK, Chatterjee S, Patra CR. Chem Commun (Camb) "Bioconjugated gold nanoparticles accelerate the growth of new blood vessels through redox signaling (2014)" 2014 Nov 28;50(92):14367-70. (Impact factor - 6.718).
110Kolluru GK, Majumder S, Chatterjee S "Rho kinase as a therapeutic target in vascular diseases: Striking nitric oxide-signaling (2014)" Nitric Oxide. 1(43C):45-54. (Impact factor - 3.521).
111Majumder S, Sinha S, Siamwala JH, Muley A, Reddy H, Kolluru GK, Veeriah V, Nagarajan S, Sridhara SRC, Kuppusamy M, Srinivasan S, Konikkat S, Soundararajan G, Venkataraman S, Saran U, Chatterjee S. "A comparative study of NONOate based NO donors: Spermine NONOate is the best suited NO donor for angiogenesis (2014)" Nitric Oxide. 36:76-86. (Impact factor - 3.521).
112K. Rajaganapathy, R. Sathiyasundar, G. Ramesh Kumar, V. K. Kalaichelvan "Designing of anti-cancerous histone deacetylase inhibitors through mimicking of protein-protein interfaces", International Journal of Pharmacy and Pharmaceutical Sciences. 6(11):208-212, (2014) (Impact Factor 0.55)
113Ashok Selvaraj, Rajadurai Chinnasamy Perumal , Nupoor Chowdhary, Palani Kannan Kandavel, Vijayaraghavan Radhakrishnan and Ramesh Kumar Gopal "Re-annotation of hypothetical proteins of Geobacter sulfurreducens PCA by integrated computation. Onl J Bioinform.15 (3):253-266, (2014) (Impact Factor IF-1.67).
114Rajadurai Chinnasamy Perumal, Ashok Selvaraj and Gopal Ramesh Kumar "Elementary Flux Mode Analysis of Acetyl-CoA Pathway in Carboxydothermus hydrogenoformans Z-2901". Adv in Bioinformatics. Volume 2014.
115TK Subazini and G.Ramesh Kumar "ASPMP - A Biochemical Pathway Resource for Aspergillus terreus NIH2624".Onl J Bioinform.15 (1): 133-140. (2014) (Impact Factor-1.67)
116R. Vijayaraghavan, S. Ashok, Jayanthi Swaminathan and G. Ramesh Kumar "GLP (Good Laboratory Practice) Guidelines in Academic and Clinical Research: Ensuring Protection and Safety". Journal of Pharmaceutical Research and Clinical Practice (JPRCP) 4(1):89-104, (2014)
117Ashok Selvaraj, Venil Sumantran, Nupoor Chowdhary and Gopal Ramesh Kumar "Prediction and classification of ABC transporters in Geobacter sulfurreducens PCA using computational approaches. Current Bioinformatics. 9(2) 166 - 172 (2014) (Impact Factor 0.92).
118Saran U, Piperni SG, Chatterjee S "Role of angiogenesis in bone repair (2014)". Arch Biochem Biophys 1;561C:109-117.
119MSubramanian M, Rao S.R., Thacker P, Sathyanarayanan A, Chatterjee S and Karunagaran D "MiR-29b downregulates canonical Wnt signaling by targeting BCL9L and other coactivators of β-catenin in human colorectal cancer cells (2014)" J Cell Biochem. 115(11):1974-84.
120Madhumitha H, Mohan V, Deepa M, Babu S, Aravindhan V. Increased Th1 and suppressed Th2 serum cytokine levels in subjects with diabetic coronary artery disease. Cardiovasc Diabetol. 2014 Jan 3;13(1):1. doi: 10.1186/1475-2840-13-1
121Gopal Ramesh Kumar, Thankaswamy Kosalai Subazini and Ashok Selvaraj (2014) "ECO-MP: E Coli-Metabolic Pathway-development of Genome-scale Metabolic Pathway Database for Escherichia coli". Trends in Bioinformatics. Volume: 7(1):7-12
122Gopal Ramesh Kumar, Thankaswamy Kosalai Subazini, Chinnasamy Perumal Rajadurai, Kandavel Palani Kannan (2014) "In silico Proteomic Functional Re-annotation of Escherichia coli K-12 Using Dynamic Biological Data Fusion Strategy". Computational Molecular Biology.Vol.4, No.4, 34-43
123Kumar SM, Swaminathan K, Clemens DL, Dey A., "GSH protects against oxidative stress and toxicity in VL-17A cells exposed to high glucose", Eur J Nutr. 2014 Apr 23, 2014
124Kumar SM, Dey A., "Regulation of Glutathione in Health and Disease with Special Emphasis on Chronic Alcoholism and Hyperglycaemia Mediated Liver Injury, A Brief Perspective", Springer Science Reviews. Jan 2014 (open access)
125Kumar SM, Swaminathan K, Clemens DL, Dey A., "Modulation of GSH with exogenous agents leads to changes in glyoxalase 1 enzyme activity in VL-17A cells exposed to chronic alcohol plus high glucose", Food Funct. Feb, 5(2):345-58., 2014
126Kavitha Sankaranarayanan, Generating a biological pacemaker- Tackling arrythmias the stem cell way (invited review) Recent patents on Regenerative Medicine Volume 3, Number 2, May 2013 , pp. 111-131(21).
127Priyadarshan Kathirvel, Gopal Ramesh Kumar and Kavitha Sankaranarayanan, "A computational prediction of Conserved MicroRNA targets of Ion channels", Current Bioinformatics. Vol. 8(19), pp. 93-111, 2013
128Aravindhan V, Mohan V, Madhumitha H, Valarmathi S, Babu S (2013) Increased Levels of Endotoxin Core Antibodies and Decreased Levels of sCD 14 Indicate Chronic Endotoxemia in Coronary Artery Disease (CURES-127). J Clin Exp Cardiolog 4: 264. doi:10.4172/2155- 9880.1000264
129Jayagopi Surendar, Vivekanandhan Aravindhan, Maradana Muralidhara Rao, Anbazhagan Ganesan, Viswanathan Mohan. Decreased serum interleukin-17 and increased transforming growth factor-β levels in subjects with metabolic syndrome (Chennai Urban Rural Epidemiology Study-95), In Press.
130Gokulakrishnan K, Aravindhan V, Amutha A, Abhijit S, Ranjani H, Anjana RM, Unnikrishnan R, Miranda P, Narayan KM, Mohan V. Serum Adiponectin Helps to Differentiate Type 1 and Type 2 Diabetes Among Young Asian Indians, Diabetes Technol Ther. 2013. Aug;15(8):696-702.
131Dey A, Lakshmanan J . The role of antioxidants and other agents in alleviating hyperglycemia mediated oxidative stress and injury in liver. Food Funct. 4(8):1148-84 (2013).
132Gnanamani A, Mitra T, Sailakshmi G, Gnanamani A, Chatterjee S. Engineering chitosan using - dicarboxylic acids. An approach to improve the mechanical strength and thermal stability (2013) Journal of Biomaterials and Nanobiotechnology (In press).
133Barui AK, Veeriah V, Mukherjee S, Manna J, Patel AK, Patra S, Pal K, Murali S, Rana RK, Chatterjee S, Patra CR. Zinc oxide nanoflowers make new blood vessels (2012) Nanoscale. 21:4:7861-9.
134Ashok Selvaraj, Venil Sumantran, Nupoor chowdhary and Gopal Ramesh Kumar (2013) Prediction and classification of ABC transporters in Geobacter sulfurreducens PCA using computational approaches.Current Bioinformatics Volume8(2013).
135Majumder S, Piguet A, Dufour JF, Chatterjee S. Study of the Cellular Mechanism of Sunitinib Mediated Inactivation of Activated Hepatic Stellate Cells and Its Implications in Angiogenesis (2013) European Journal of Pharmacology. 705 (1-3):86-95.
136L-theanine promotes nitric oxide production in endothelial cells through eNOS phosphorylation (2012) Siamwala JH, Paul DM, Majumder S, Joshi M, Sinkar VP, Banerjee G, and Chatterjee S J Nutr Biochem (In Press)
137Swaminathan A, Sridhara, Swaraj SRA, Sinha S, Nagarajan S, Balaguru UM, Siamwala JH, Rajendran S, Saran U, Chatterjee S. Nitrites derived from Foneiculum vulgare (Fennel) seeds promotes vascular functions (2012). J Food Sci. 77(12):H273-9
138Jagannathan L, Swaminathan K, Kumar SM, Kumar GR, Dey A. Bio-informatics based analysis of genes implicated in alcohol mediated liver injury. Gene. 2012 Feb 15;494(1):130-9.
139Chandrasekaran K, Swaminathan K, Kumar SM, Clemens DL, Dey A. Increased oxidative stress and toxicity in ADH and CYP2E1 overexpressing human hepatoma VL-17A cells exposed to high glucose. Integr Biol (Camb). May;4(5):550-63.- 2012
140Jamila H Siamwala, Vimal Veeriah, Krishna Priya M, Saranya Rajendran, Uttara Saran, Swaraj Sinha, Shunmugam Nagarajan, Pradeep T and Chatterjee S. Nitric oxide rescues thalidomide mediated teratogenicity, Scientific Reports, (In press) 2012
141G. Sailakshmi, Mitra T, Sinha S, Chatterjee S, A. Gnanamani and Mandal AB J. Macromol. Suberic Acid Acts as a Dissolving agent as well as a crosslinker for natural polymers (carbohydrate and protein): A detailed discussion on the chemistry behind the interaction, Sci. Part A - Pure and Applied Chemistry, In Press. 2012
142Majumder S, Sreedhara SR, Banerjee S, Chatterjee S. TNF α signaling beholds thalidomide saga: A review of mechanistic role of TNF-α signaling under thalidomide, Curr Top Med Chem. In Press. 2012
143Siamwala JH, Paul DM, Majumder S, Joshi M, Sinkar VP, Banerjee G, and Chatterjee S J Nutr Biochem (In Press). L- theanine promotes nitric oxide production in endothelial cells through eNOS phosphorylation , J Nutr Biochem, In Press. 2012
144Rajadurai Chinnasamy Perumal, Ashok Selvaraj, Saranya Ravichandran,Gopal Ramesh Kumar. Computational Kinetic Studies of Pyruvate Metabolism in Carboxydothermus hydrogenoformans Z-2901 for improved Hydrogen Production, Biotechnology and Bioprocess Engineering. 17:565-575.-2012
145Periyasamy Sivamani, Ganesan Singaravelu, Venkatesan Thiagarajan, Tamilarasu Jayalakshmi & Gopal Ramesh Kumar, Comparative molecular docking analysis of essential oil constituents as elastase inhibitors, Bioinformation, 8(10):457-460. 2012
146Ponnurengam Malliappan Sivakumar, Naga Vignesh Selvaraj, G. Ramesh, J. Mohanapriya, Veluchamy Prabhawathi and Mukesh Doble, Computational Approaches To Improve Aggrecanase-1 Inhibitory Activity Of (4-Keto) Phenoxy) Methyl biphenyl-4-Sulfonamide: Group Based QSAR and Docking Studies. Medicinal Chemistry, Vol 8, No 4 , 2012, 673-682. 2012
147Priyadarshan Kathirvel, Gopal Ramesh Kumar and Kavitha Sankaranarayanan, A Computational prediction of conserved microRNA targets of ion channels in vertebrates. Current Bioinformatics, 2012
148C.P. Rajadurai,Ashok S,Nupoor Chowdhary and G. Ramesh Kumar (Accepted) Functional and comparative analysis of novel dehydrogenase genes in Carboxydothermus hydrogenoformans Z-2901. Ind.J.Biotech. 2012
149Priyadarshan K., Ramesh Kumar G and Kavitha Sankaranarayanan, A computational prediction of Conserved MicroRNA targets of Ion channels, (Current Bioinformatics) In Press, 2012
150Indulekha K, Surendar J, Anjana RM, Gokulakrishnan K, Balasubramanyam M, Aravindhan V, Mohan V. Circulating levels of high molecular weight (HMW) adiponectin and total adiponectin in relation to fat distribution, oxidative stress and inflammation in Asian Indians. Dis Markers. 2012 Jan 1;33(4):185-92. doi: 10.3233/DMA-2012-0924.
151Aravindhan V, Mohan V, Surendar J, Rao MM, Anuradha R, Deepa M, Babu S. Effect of filarial infection on serum inflammatory and atherogenic biomarkers in coronary artery disease (CURES-121). Am J Trop Med Hyg. 2012 May;86(5):828-33.
152Surendar J, Mohan V, Pavankumar N, Babu S, Aravindhan V. Increased levels of serum granulocyte-macrophage colony-stimulating factor is associated with activated peripheral dendritic cells in type 2 diabetes subjects (CURES-99). Diabetes Technol Ther. 2012 Apr;14(4):344-9.Epub 2011 Dec 9
153Jayagopi Surendar, Viswanathan Mohan, Maradana Muralidhara Rao, Subash Babu, and Vivekanandhan Aravindhan, Increased Levels of Both Th1 and Th2 Cytokines in Subjects with Metabolic Syndrome (CURES-103) DIABETES TECHNOLOGY &THERAPEUTICS, Volume 13, Number 4, 2011, ª Mary Ann Liebert, Inc. DOI: 10.1089/dia.2010.0178
154Chinnasamy Perumal Rajadurai,Thankaswamy Kosalai Subazini and Gopal Ramesh Kumar(2011) An integrated re-annotation approach for functional predictions of hypothetical proteins in microbial genomes. Current Bioinformatics,Vol.6(4): 450-461.
155R. Vijayaraghavan , G. Jayababu , R. Prasad , P.E Thirugnanam, Gayathri Shivkumar , V.T. Sriraam and G. Ramesh Kumar (2011)BIO-ANALYTICAL METHOD DEVELOPMENT AND VALIDATION FOR OMEPRAZOLE USING LC-MS /MS.IJPSR,Vol.2(9):748-759.
156R Narayanaswamy , A Gnanamani , Sangeetha Shanmugasamy , Ramesh Kumar Gopal and AB Mandal (2011) Bioinformatics in crosslinking chemistry of collagen with selective crosslinkers. BMC Research Notes.4:399
157G Sailakshmi,Tapas Mitra,A. Gnanamani,S. Thirupathy Kumara Raja,T.Thiruselvi, Naga Vignesh Selvaraj,Gopal Ramesh and A. B. Mandal (2011) Bonding interactions and stability assessment of biopolymer material prepared using type III collagen of avian intestine and anionic polysaccharides. J Mater Sci: Mater Med.DOI 10.1007/s10856-011-4337-0
158Chandrasekaran K, Swaminathan K, Mathan Kumar S, Clemens DL, Dey A, In vitro evidence for chronic alcohol and high glucose mediated increased oxidative stress and hepatotoxicity, Alcohol Clin Exp Res, Jun;36(6): 1004-12-2012
159Chandrasekaran K, Swaminathan K, Mathan Kumar S, Clemens DL, Dey A, In vitro evidence for chronic alcohol and high glucose mediated increased oxidative stress and hepatotoxicity, Alcohol Clin Exp Res, Jun;36(6): 1004-12- 2012
160Majumder S, Siamwala JH, Srinivasan S, Sinha S, Sridhara SR, Soundararajan G, Seerapu HR, Chatterjee S. Simulated microgravity promoted differentiation of bipotential murine oval liver stem cells by modulating BMP4/Notch1 signaling. J Cell Biochem. 2011 Jul;112(7):1898-908.
161Manral S, Bhatia S, Sinha R, Kumar A, Rohil V, Arya A, Dhawan A, Arya P, Joshi R, Sreedhara SC, Gangopadhyay S, Bansal SK, Chatterjee S, Chaudhury NK, Vijayan VK, Saso L, Parmar VS, DePass AL, Prasad AK, Raj HG. Normalization of deranged signal transduction in lymphocytes of COPD patients by the novel calcium channel blocker H-DHPM. Biochimie. 2011 Jul;93(7):1146-56. Epub 2011 Apr 20.
162Lee J, Majumder S, Chatterjee S, Muralidhar K. Inhibitory activity of the peptides derived from buffalo prolactin on angiogenesis. J Biosci. 2011. Jun;36(2):341-54.
163T.K.Subazini and G.Ramesh Kumar (2011) Characterization of Lovastatin biosynthetic cluster proteins in Aspergillus terreus strain ATCC 20542.Bioinformation 6(7): 250-254.
164P.Vijayalakshmi,G.Ramesh Kumar,C.P.Rajadurai,P. Daisy (2011) Functional genomics and reverse vaccinology approach to identify better vaccine for tuberculosis.International Journal of BioSciences and Technology (2011) 4(4):23-28.
165T. Jayalakshmi,P. Krishnamoorthy,G.Ramesh Kumar and P.Sivamani(2011) Characterisation and Identification of Feather -Degrading Streptomyces sp for Chick Feather Wastes Degradation.International Journal of Biotechnology and Bioengineering Research.2(2):169-174.
166Tapas Mitraa,G. Sailakshmia,A. Gnanamani,S.Thirupathi Kumar Rajaa, T.Thiruselvi,V. Mangala Gowri, Naga Vignesh Selvaraj, Gopal Ramesh, A.B. Mandal (2011) Preparation and characterization of a thermostable and biodegradable biopolymers using natural cross-linker.Int.J.Biol. Macromol.48:276-285.
167Surendar J, Mohan V, Rao MM, Babu S, Aravindhan V, Increased Levels of Both Th1 and Th2 Cytokines in Subjects with Metabolic Syndrome (CURES-103), Diabetes Technol Ther. 2011 Feb 28. [Epub ahead of print]
168Karthikeyan C., Kavitha Swaminathan, S Mathan Kumar, Suvro Chatterjee, Dahn L Clemens & Aparajita Dey, Elevated glutathione level does not protect against chronic alcohol mediated apoptosis in recombinant human hepatoma cell line VL- 17A over-expressing alcohol metabolizing enzymes- alcohol dehydrogenase and cytochrome P450 2E1,Toxicology in Vitro, 25:969-78 (2011)
169Aparajita Dey & S Mathan Kumar, Cytochrome P450 2E1 and hyperglycemia induced liver injury, Cell Biology and Toxicology, 27:285-310 (2011).
170Majumder S, Siamwala JH, Srinivasan S, Sinha S, Sridhara SRC, Soundararajan G, Seerapu HR, Chatterjee S, (2011), Simulated Microgravity Promoted Differentiation Of Bipotential Murine Oval Liver Stem Cells by Modulating BMP4/Notch1 Signaling, J. Cell. Biochem 112:1898-1908
171Chandana T., Gency Ponrose, K.M.Cherian and Kavitha Sankaranarayanan, 'HUMANIZED' STEM CELL CULTURE TECHNIQUES - THE ANIMAL SERUM CONTROVERSY Stem Cells International (2011) Volume 2011 (2011), Article ID 504723, doi:10.4061/2011/504723
172Vivekanandhan Aravindhan ,* Vishwanathan Mohan , Jayagopi Surendar , Maradana Muralidhara Rao , Harish Ranjani, V. Kumaraswami , Thomas B. Nutman , and Subash Babu. Decreased Prevalence of Lymphatic Filariasis Among Subjects with Type-1 Diabetes, Am. J. Trop. Med. Hyg., 83(6), 2010, pp. 1336-1339, doi:10.4269/ajtmh.2010.10-0410 Copyright © 2010 by The American Society of Tropical Medicine and Hygiene
173Vivekanandhan Aravindhan, Viswanathan Mohan, Jayagopi Surendar, Maradana Muralidhara Rao, Nathella Pavankumar, Mohan Deepa, Ramanujam Rajagopalan, Vasanthapuram Kumaraswami, Thomas B. Nutman, Subash Babu.Decreased Prevalence of Lymphatic Filariasis among Diabetic Subjects Associated with a Diminished Pro- Inflammatory Cytokine Response (CURES 83),, June 2010 | Volume 4 | Issue 6 | e707
174Sinha S, Sridhara SRC, Srinivasan S, Muley A, Majumder S, Kuppusamy M, Gupta R, Chatterjee S. NO (Nitric oxide): The Ring Master. Eur. J. Cell Biol. 90 (1): 58-71
175Siamwala JH, Majumder S, Tamilarasan KP, Muley A, Seerapu HR, Kolluru GK, Sinha S, Chatterjee S. (2010) Simulated microgravity promotes nitric oxide-supported angiogenesis using the iNOS-cGMP-PKG pathway in macrovascular endothelial cells. FEBS Letter 584 (15):3415-3423
176Majumder S, Ilayaraja M, Seerapu HR, Sinha S, Siamwala JH, Chatterjee S. (2010) Chick embryo partial ischemia model: a new approach to study ischemia ex vivo. PLoS One. 7;5(5):e10524.
177Seerapu HB, Subramaniam GP, Majumder S, Sinha S, Bisana S, Mahajan S, Kolluru GK, Muley A, Siamwala JH, G I, Chatterjee S. (2010) Inhibition of dynamin-2 confers endothelial barrier dysfunctions by attenuating nitric oxide production. Cell Biol Int. 34(7):755-761.
178Kolluru GK, Siamwala JH, Chatterjee S. eNOS phosphorylation in health and disease (2010) Biochimie. 92(9):1186-1198.
179Kolluru GK, Sinha S, Majumder S, Muley A, Siamwala JH, Gupta R, Chatterjee S. (2010) Shear stress promotes nitric oxide production in endothelial cells by sub-cellular delocalization of eNOS: A basis for shear stress mediated angiogenesis. Nitric Oxide. 22(4):304-315.
180Jamila H Siamwala , Himabindu Reddy.S, Syamantak Majumder, Gopi Krishna Kolluru, Ajit Muley, Swaraj Sinha, Chatterjee S (2010). Simulated microgravity perturbs actin polymerization to promote nitric oxide associated migration in human immortalized Eahy926 cells. Protoplasma (In Press).
181Ranju Kumari et al., Chatterjee S (2010). Calreticulin Transacylase: Genesis, mechanism of action and biological applications. Biochimie (In Press).
182Jetti SK, Swain SM, Majumder S, Chatterjee S, Venkateshamurthy P, Bera A (2010) Evaluation of the role of Nitric Oxide in acid sensing ion channel mediated cell death. Nitric Oxide 2010; 22(3):213-9.
183Muley A, Majumder S, Kolluru GK, Parkinson S, Viola H, Hool L, Arfuso F, Ganss R, Dharmarajan A , Chatterjee S (2010) Secreted Frizzled-Related Protein 4: An Angiogenesis Inhibitor. . Am J Pathol. 2010;176(3):1505-16.
184Chandrasekaran K, Swaminathan K, Chatterjee S, Dey A (2010) Apoptosis in HepG2 cells exposed to high glucose. Toxicology In Vitro 2010;24(2):387-96.
185A Stage-Scanning Laser Confocal Microscope and Protocol for DNA Methylation Sequencing, V Vaishnavi, Litty Varghese, Baquir Mohammed Jaffar Ali, Journal of Biomedical Science and Engineering, 2010, 3, 496-500
186Chinnasamy Perumal Rajadurai and Gopal Ramesh Kumar (2010) Functional and comparative genomics studies on Carboxydothermus hydrogenoformans specific to CO-metabolism and hydrogen production. Online Journal of Bioinformatics.11 (1):90-105.
187Jayashree Mohandass, Saranya Ravichandran , Koganti Srilakshmi , Chinnasamy Perumal Rajadurai , Sangeetha Shanmugasamy and Gopal Ramesh Kumar (2010) BCDB- A Database for Breast Cancer Research and Information. Bioinformation.5(1) 1-3.
188Jayalakshmi,T.Krishnamoorthy,.Ramesh Kumar G and P.Sivamani (2010)Isolation and Screening of a Feather-Degrading Keratinolytic Actinomycetes from Actinomyces sp. Journal of American Science.6(12):45-48.
189Kalyaanamoorthy Subha,Gopal Ramesh Kumar,Rajasekaran Rajalakshmi and Ganesan Aravindhan (2010) A Novel Strategy for Mechanism Based Computational Drug Discovery. Biomarkers in Cancer.2:35-42.
190Vijayaraghavan R and G. Ramesh Kumar(2010) IMPACT OF PHASE ZERO TRIALS (MICRO-DOSING)IN CLINICAL TRIAL RESEARCH. Int. Journal of Appl.Biology and Pharma.Technol.I(2):486-491.
191Dey A, Swaminathan K, Hyperglycemia-induced mitochondrial alterations in liver, Life Sci.;87(7-8):197-214. (2010).